Friday, September 14, 2012

96 well-thought reasons (well almost*)!



If you are doing biological research chances are very high that you must have at least once used a microtiter plate 96-well high throughput (HTP) also commonly know as 96-well. For some the HTP or even a hyper HTP (384-well) is bread and butter. The American National Standards Institute has even defined the dimensions for 96-well format. But have you ever wondered why is it is a 96-well not any other number. Well if you have some thoughts it will be great to hear as well. But here is what we in the lab came up with, ‘we’ here are myself, John, Marvin, Enfu etc., thanks to lively discussion and contributions.

A quick Google search will give you the history of microtiter plate and here is a quick primer.  The very first microtiter plate can be traced back to the Hungarian scientist Dr. Gyola Takátsy around 1950s(1-3). Dr. Takátsy used this innovative technique for influenza virus detection during an epidemic. He published the idea, which was picked up by the Linbro Company and made 96-well microplate. More refinement of microtiter plate, automation and wide applications came along afterwards. A list of further reading can be found at the end if you would like to know more about the evolution of microtiter plate1-6.

So after reading all about the history/evolution it is still not clear how Dr. Takátsy came to a conclusion that 12x8=96-well is the best format. It seems that Dr. Takátsy very first microtiter plate was a 6x12=72-well, he also has tried 10x10=100-well. To quote from an article4

For time-saving, Dr. Takátsy soon replaced the wire loops by thin iron or steel knitting needles that could be flame-sterilized. He arranged the needles in a way that he could keep them in his hands without problems. This led to a plate with 8 x 12 wells that could be quickly and easily filled the 96-well plate was born”.

The 96-well format has began its humble being from early 1950’s, this rules out the ‘chicken-egg problem’ of which is earlier the 8x12 tip boxes or 8x12 plate. Thus the 96-well format has clearly dictated the market to make 96 tip boxes, multi-channel pipette, PCR blocks etc.,

Coming back to the original question of why 96? Conventionally a 10x10=100-well seems to be an ideal plate, 100 a round composite number. Where in the first instance 96 might look like a random number, but it the highest number below 100 to have maximum positive divisors (96 is divisible by: 1, 96 and 2,3,4,6,8,12,16,24,32,48). This means one can make easy partitions, serial dilutions, duplications and combinations. There smaller options too but they are basically divisors or 96 (for eg., 24-well crystallization plate/tissue culture plate).  Nextal has made a new format of 6x3=18-well crystallization plate, but again not a square plate (see below).

A perfect 10x10=100-well will give you a square block and it is quite easy to mix-up with a four equiv-dimension block. Although to some extent this argument holds true for a rectangular 8x12 block too, but there is only one possible way doing wrong with a rectangular block. Plus a 2:3 ratio as originally Dr. Takátsy said is easy to hold/handle by hand.

We can argue more good things about the 8x12=96-well format, but to some extent it sounds like there is ‘no choice of other option so we like it’. It is nearly impossible to even think about another format (the 384 and more are mere multiplications of 96). According to Dr Peter Banks5 the 2009 global market for microplates is ~$500million. If you add up the entire tip box formats and other instrument formats the sum will go considerably higher. So for the moment sit tight and do your HTP assay in 96-well format (or more) thinking how good the 96-well format is. But don’t forget to thank Dr. Takátsy for inventing a tool that makes our life easy.



* I couldn’t come up with 96 reasons, it’s like using only few wells in a 96-well plate!

Saturday, September 1, 2012

The casual visitor and a resident bug

Jewel beetle (Ponvandu in Tamil) is one of the colorful insect and probably the most pleasant insect to observe. These insect sightings are becoming rare these days, but here is a casual visitor who showed up in our previous garden in Ranipet, India.

The below one was pictured in our new home garden, unlike the above casual visitor this one is a permanent resident hanging out in maize bloom.